HL_8XT0_057

3D structure

PDB id

8XT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCCACG

Length

6 nucleotides

Bulged bases

8XT0|1|S1|A|666

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT0|1|S1|C|663
8XT0|1|S1|C|664
8XT0|1|S1|C|665
8XT0|1|S1|A|666
8XT0|1|S1|C|667
8XT0|1|S1|G|668

Current chains

Chain S1

12s rRNA

Nearby chains

Chain SG

Small ribosomal subunit protein uS7m

Chain SI

Small ribosomal subunit protein uS9m

Chain SJ

Small ribosomal subunit protein uS10m

Chain SN

Small ribosomal subunit protein uS14m

Chain SZ

Small ribosomal subunit protein uS3m