HL_8XT2_019

3D structure

PDB id

8XT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAUCACAC

Length

8 nucleotides

Bulged bases

8XT2|1|L1|C|689, 8XT2|1|L1|A|693

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XT2|1|L1|G|679
8XT2|1|L1|A|680
8XT2|1|L1|U|681
8XT2|1|L1|C|687
8XT2|1|L1|A|688
8XT2|1|L1|C|689
8XT2|1|L1|A|693
8XT2|1|L1|C|694

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LQ

Large ribosomal subunit protein bL17m

Chain LV

39S ribosomal protein L22, mitochondrial

Chain LW

Large ribosomal subunit protein uL23m

Chain Lu

Large ribosomal subunit protein uL29m

Chain Sf

Large ribosomal subunit protein mL65