HL_8XT2_031
3D structure
- PDB id
- 8XT2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUCACCAG
- Length
- 9 nucleotides
- Bulged bases
- 8XT2|1|L1|U|1194, 8XT2|1|L1|C|1195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XT2_031 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.265
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8XT2|1|L1|C|1192
8XT2|1|L1|U|1193
8XT2|1|L1|U|1194
8XT2|1|L1|C|1195
8XT2|1|L1|A|1196
8XT2|1|L1|C|1197
8XT2|1|L1|C|1198
8XT2|1|L1|A|1199
8XT2|1|L1|G|1200
Current chains
- Chain L1
- 16s rRNA
Nearby chains
- Chain LO
- Large ribosomal subunit protein uL15m
- Chain La
- Large ribosomal subunit protein bL27m
- Chain Li
- Large ribosomal subunit protein bL35m
- Chain Ll
- Large ribosomal subunit protein mL38
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