HL_8XT2_044
3D structure
- PDB id
- 8XT2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GCAUCCCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XT2_044 not in the Motif Atlas
- Geometric match to HL_7VTI_001
- Geometric discrepancy: 0.2807
- The information below is about HL_7VTI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89167.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
8XT2|1|S1|G|54
8XT2|1|S1|C|55
8XT2|1|S1|A|56
8XT2|1|S1|U|57
8XT2|1|S1|C|58
8XT2|1|S1|C|59
8XT2|1|S1|C|60
8XT2|1|S1|C|61
Current chains
- Chain S1
- 12s rRNA
Nearby chains
- Chain SP
- Small ribosomal subunit protein bS16m
- Chain SS
- Small ribosomal subunit protein mS40
- Chain Sb
- Small ribosomal subunit protein mS26
- Chain Sj
- Small ribosomal subunit protein mS34
Coloring options: