HL_8XU8_007

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8XU8|1|2|U|278

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8XU8_007 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2096

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

8XU8|1|2|C|276
8XU8|1|2|U|277
8XU8|1|2|U|278
8XU8|1|2|G|279

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Y

Large ribosomal subunit protein eL24A