HL_8XU8_089

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAAACGAUAACGC

Length

15 nucleotides

Bulged bases

8XU8|1|A|A|2637, 8XU8|1|A|C|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|G|2632
8XU8|1|A|U|2633
8XU8|1|A|U|2634
8XU8|1|A|A|2635
8XU8|1|A|A|2636
8XU8|1|A|A|2637
8XU8|1|A|C|2638
8XU8|1|A|G|2639
8XU8|1|A|A|2640
8XU8|1|A|U|2641
8XU8|1|A|A|2642
8XU8|1|A|A|2643
8XU8|1|A|C|2644
8XU8|1|A|G|2645
8XU8|1|A|C|2646

Current chains

Chain A

25S rRNA

Nearby chains

Chain L

Large ribosomal subunit protein uL16

Chain V

Large ribosomal subunit protein eL21A

Chain d

Large ribosomal subunit protein eL29