HL_8Y0B_001

3D structure

PDB id

8Y0B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of FnCas12a in complex with pre-crRNA and 12nt target DNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

CUGUUG

Length

6 nucleotides

Bulged bases

8Y0B|1|B|G|-9, 8Y0B|1|B|U|-8, 8Y0B|1|B|U|-7

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

8Y0B|1|B|C|-11
8Y0B|1|B|U|-10
8Y0B|1|B|G|-9
8Y0B|1|B|U|-8
8Y0B|1|B|U|-7
8Y0B|1|B|G|-6

Current chains

Chain B

RNA (53-MER)

Nearby chains

Chain A

CRISPR-associated endonuclease Cas12a