HL_8Y0U_043
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- CUUCGG
- Length
- 6 nucleotides
- Bulged bases
- 8Y0U|1|C1|U|1925
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Y0U_043 not in the Motif Atlas
- Homologous match to HL_5TBW_043
- Geometric discrepancy: 0.1694
- The information below is about HL_5TBW_043
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.1
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
8Y0U|1|C1|C|1923
8Y0U|1|C1|U|1924
8Y0U|1|C1|U|1925
8Y0U|1|C1|C|1926
8Y0U|1|C1|G|1927
8Y0U|1|C1|G|1928
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain C2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Ln
- Large ribosomal subunit protein eL41A
- Chain Lp
- Large ribosomal subunit protein eL43A
Coloring options: