HL_8Y0U_088

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

UGGCCGGUCGGAUUUCCA

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C2|U|650
8Y0U|1|C2|G|651
8Y0U|1|C2|G|652
8Y0U|1|C2|C|653
8Y0U|1|C2|C|654
8Y0U|1|C2|G|655
8Y0U|1|C2|G|656
8Y0U|1|C2|U|657
8Y0U|1|C2|C|658
8Y0U|1|C2|G|676
8Y0U|1|C2|G|677
8Y0U|1|C2|A|678
8Y0U|1|C2|U|679
8Y0U|1|C2|U|680
8Y0U|1|C2|U|681
8Y0U|1|C2|C|682
8Y0U|1|C2|C|683
8Y0U|1|C2|A|684

Current chains

Chain C2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9-A