HL_8Y0U_116

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

UGAUUUUAUGCA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C1|U|1564
8Y0U|1|C1|G|1565
8Y0U|1|C1|A|1566
8Y0U|1|C1|U|1567
8Y0U|1|C1|U|1568
8Y0U|1|C1|U|1569
8Y0U|1|C1|U|1570
8Y0U|1|C1|A|1571
8Y0U|1|C1|U|1572
8Y0U|1|C1|G|1573
8Y0U|1|C1|C|1574
8Y0U|1|C1|A|1575

Current chains

Chain C1

25S rRNA

Nearby chains

Chain C3

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

Large ribosomal subunit protein uL23