HL_8Y0U_117

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

8Y0U|1|C1|C|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C1|G|2534
8Y0U|1|C1|A|2535
8Y0U|1|C1|A|2536
8Y0U|1|C1|U|2537
8Y0U|1|C1|U|2538
8Y0U|1|C1|C|2539
8Y0U|1|C1|A|2540
8Y0U|1|C1|U|2541
8Y0U|1|C1|U|2542
8Y0U|1|C1|U|2543
8Y0U|1|C1|U|2544
8Y0U|1|C1|C|2545

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LG

Large ribosomal subunit protein eL8A

Chain SB

40S ribosomal protein S1-A