HL_8Y0U_119

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GCCUUGUGC

Length

9 nucleotides

Bulged bases

8Y0U|1|C2|U|278, 8Y0U|1|C2|U|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0U|1|C2|G|274
8Y0U|1|C2|C|275
8Y0U|1|C2|C|276
8Y0U|1|C2|U|277
8Y0U|1|C2|U|278
8Y0U|1|C2|G|279
8Y0U|1|C2|U|280
8Y0U|1|C2|G|281
8Y0U|1|C2|C|282

Current chains

Chain C2

18S rRNA

Nearby chains

Chain LW

Large ribosomal subunit protein eL24A

Chain SG

40S ribosomal protein S6-A