HL_8Y0X_057

3D structure

PDB id

8Y0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dormant ribosome with SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGUAACUAUGU

Length

11 nucleotides

Bulged bases

8Y0X|1|L5|A|3760

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0X|1|L5|A|3756
8Y0X|1|L5|G|3757
8Y0X|1|L5|U|3758
8Y0X|1|L5|A|3759
8Y0X|1|L5|A|3760
8Y0X|1|L5|C|3761
8Y0X|1|L5|U|3762
8Y0X|1|L5|A|3763
8Y0X|1|L5|U|3764
8Y0X|1|L5|G|3765
8Y0X|1|L5|U|3768

Current chains

Chain L5

28S rRNA

Nearby chains

Chain CB

Elongation factor 2

Chain S2

Small subunit ribosomal RNA; SSU rRNA