HL_8Y0X_061

3D structure

PDB id

8Y0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dormant ribosome with SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGACAUGAGUGAUCGUUU

Length

18 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y0X|1|L5|A|3945
8Y0X|1|L5|G|3946
8Y0X|1|L5|A|3947
8Y0X|1|L5|C|3948
8Y0X|1|L5|A|3949
8Y0X|1|L5|U|3950
8Y0X|1|L5|G|3951
8Y0X|1|L5|A|3952
8Y0X|1|L5|G|3953
8Y0X|1|L5|U|4060
8Y0X|1|L5|G|4061
8Y0X|1|L5|A|4062
8Y0X|1|L5|U|4063
8Y0X|1|L5|C|4064
8Y0X|1|L5|G|4065
8Y0X|1|L5|U|4066
8Y0X|1|L5|U|4067
8Y0X|1|L5|U|4068

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a