HL_8Y36_026

3D structure

PDB id

8Y36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

ACGAGGGGGGUUACCGAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y36|1|A|A|920
8Y36|1|A|C|921
8Y36|1|A|G|922
8Y36|1|A|A|923
8Y36|1|A|G|924
8Y36|1|A|G|925
8Y36|1|A|G|926
8Y36|1|A|G|927
8Y36|1|A|G|937
8Y36|1|A|G|938
8Y36|1|A|U|939
8Y36|1|A|U|940
8Y36|1|A|A|941
8Y36|1|A|C|942
8Y36|1|A|C|943
8Y36|1|A|G|944
8Y36|1|A|A|945
8Y36|1|A|A|946
8Y36|1|A|U|947

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain K

Large ribosomal subunit protein uL16