HL_8Y36_036

3D structure

PDB id

8Y36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UUAGAAAUCCGG

Length

12 nucleotides

Bulged bases

8Y36|1|A|A|1533, 8Y36|1|A|A|1537, 8Y36|1|A|U|1540, 8Y36|1|A|C|1541

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y36|1|A|U|1531
8Y36|1|A|U|1532
8Y36|1|A|A|1533
8Y36|1|A|G|1534
8Y36|1|A|A|1537
8Y36|1|A|A|1538
8Y36|1|A|A|1539
8Y36|1|A|U|1540
8Y36|1|A|C|1541
8Y36|1|A|C|1542
8Y36|1|A|G|1543
8Y36|1|A|G|1544

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL2