Loop HL_8Y36

3D structure

PDB id: 8Y36 (explore in PDB, NAKB, or RNA 3D Hub)
Description: cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.65 Å

Loop

Sequence: GAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAGUGCGUAAUAGCUCAC
Length: 49 nucleotides
Bulged bases: 8Y36|1|A|G|1112, 8Y36|1|A|U|1126, 8Y36|1|A|A|1139, 8Y36|1|A|A|1140, 8Y36|1|A|U|1141, 8Y36|1|A|A|1142
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8Y36|1|A|G|1100
8Y36|1|A|A|1101
8Y36|1|A|U|1102
8Y36|1|A|G|1103
8Y36|1|A|U|1104
8Y36|1|A|U|1105
8Y36|1|A|G|1106
8Y36|1|A|G|1107
8Y36|1|A|C|1108
8Y36|1|A|U|1109
8Y36|1|A|U|1110
8Y36|1|A|A|1111
8Y36|1|A|G|1112
8Y36|1|A|A|1113
8Y36|1|A|A|1114
8Y36|1|A|G|1115
8Y36|1|A|C|1116
8Y36|1|A|A|1117
8Y36|1|A|G|1118
8Y36|1|A|C|1119
8Y36|1|A|C|1120
8Y36|1|A|A|1121
8Y36|1|A|U|1122
8Y36|1|A|C|1123
8Y36|1|A|A|1124
8Y36|1|A|U|1125
8Y36|1|A|U|1126
8Y36|1|A|U|1127
8Y36|1|A|A|1128
8Y36|1|A|A|1129
8Y36|1|A|A|1130
8Y36|1|A|G|1131
8Y36|1|A|A|1132
8Y36|1|A|G|1133
8Y36|1|A|U|1134
8Y36|1|A|G|1135
8Y36|1|A|C|1136
8Y36|1|A|G|1137
8Y36|1|A|U|1138
8Y36|1|A|A|1139
8Y36|1|A|A|1140
8Y36|1|A|U|1141
8Y36|1|A|A|1142
8Y36|1|A|G|1143
8Y36|1|A|C|1144
8Y36|1|A|U|1145
8Y36|1|A|C|1146
8Y36|1|A|A|1147
8Y36|1|A|C|1148

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain 4: Large ribosomal subunit protein bL36
Chain G: Large ribosomal subunit protein uL6

HL_8Y36_071