HL_8Y37_029

3D structure

PDB id

8Y37 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GUUGGCUUAGAAGCAGCCAUC

Length

21 nucleotides

Bulged bases

8Y37|1|A|A|1114, 8Y37|1|A|G|1115, 8Y37|1|A|C|1116, 8Y37|1|A|U|1122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y37|1|A|G|1103
8Y37|1|A|U|1104
8Y37|1|A|U|1105
8Y37|1|A|G|1106
8Y37|1|A|G|1107
8Y37|1|A|C|1108
8Y37|1|A|U|1109
8Y37|1|A|U|1110
8Y37|1|A|A|1111
8Y37|1|A|G|1112
8Y37|1|A|A|1113
8Y37|1|A|A|1114
8Y37|1|A|G|1115
8Y37|1|A|C|1116
8Y37|1|A|A|1117
8Y37|1|A|G|1118
8Y37|1|A|C|1119
8Y37|1|A|C|1120
8Y37|1|A|A|1121
8Y37|1|A|U|1122
8Y37|1|A|C|1123

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36