HL_8Y37_036

3D structure

PDB id

8Y37 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

UUAAAUCCGG

Length

10 nucleotides

Bulged bases

8Y37|1|A|A|1537, 8Y37|1|A|U|1540, 8Y37|1|A|C|1541

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y37|1|A|U|1531
8Y37|1|A|U|1532
8Y37|1|A|A|1537
8Y37|1|A|A|1538
8Y37|1|A|A|1539
8Y37|1|A|U|1540
8Y37|1|A|C|1541
8Y37|1|A|C|1542
8Y37|1|A|G|1543
8Y37|1|A|G|1544

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

Large ribosomal subunit protein uL2