HL_8Y37_068
3D structure
- PDB id
- 8Y37 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 8Y37|1|B|C|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Y37_068 not in the Motif Atlas
- Geometric match to HL_4V9F_011
- Geometric discrepancy: 0.1622
- The information below is about HL_4V9F_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.9
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
8Y37|1|B|C|36
8Y37|1|B|A|37
8Y37|1|B|U|38
8Y37|1|B|G|39
8Y37|1|B|C|40
8Y37|1|B|C|41
8Y37|1|B|G|42
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain M
- Large ribosomal subunit protein uL18
- Chain Y
- Large ribosomal subunit protein bL31B
Coloring options: