HL_8Y38_108

3D structure

PDB id

8Y38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

UAGGGUUAACGCCCAG

Length

16 nucleotides

Bulged bases

8Y38|1|A|G|1760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y38|1|A|U|1757
8Y38|1|A|A|1758
8Y38|1|A|G|1759
8Y38|1|A|G|1760
8Y38|1|A|G|1761
8Y38|1|A|U|1762
8Y38|1|A|U|1763
8Y38|1|A|A|1764
8Y38|1|A|A|1765
8Y38|1|A|C|1766
8Y38|1|A|G|1767
8Y38|1|A|C|1768
8Y38|1|A|C|1769
8Y38|1|A|C|1770
8Y38|1|A|A|1771
8Y38|1|A|G|1772

Current chains

Chain A

23S ribosomal RNA

Nearby chains