HL_8Y39_026

3D structure

PDB id

8Y39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGGCCGGUUACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y39|1|A|G|924
8Y39|1|A|G|925
8Y39|1|A|G|926
8Y39|1|A|G|927
8Y39|1|A|C|928
8Y39|1|A|C|929
8Y39|1|A|G|937
8Y39|1|A|G|938
8Y39|1|A|U|939
8Y39|1|A|U|940
8Y39|1|A|A|941
8Y39|1|A|C|942
8Y39|1|A|C|943

Current chains

Chain A

23S ribosomal RNA

Nearby chains