HL_8YUQ_099

3D structure

PDB id

8YUQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

8YUQ|1|a|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8YUQ_099 not in the Motif Atlas

Geometric match to HL_8SP9_002

Geometric discrepancy: 0.1324

The information below is about HL_8SP9_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

8YUQ|1|a|U|2796
8YUQ|1|a|U|2797
8YUQ|1|a|U|2798
8YUQ|1|a|A|2799

Current chains

Chain a

23S rRNA

Nearby chains