HL_8YUS_011

3D structure

PDB id

8YUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8YUS|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8YUS_011 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2889

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8YUS|1|A|G|462
8YUS|1|A|U|463
8YUS|1|A|U|464
8YUS|1|A|A|465
8YUS|1|A|A|466
8YUS|1|A|U|467
8YUS|1|A|A|468
8YUS|1|A|C|469
8YUS|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains