HL_8Z70_085

3D structure

PDB id

8Z70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUCAUUUU

Length

9 nucleotides

Bulged bases

8Z70|1|A|U|2537, 8Z70|1|A|U|2538, 8Z70|1|A|C|2539, 8Z70|1|A|A|2540

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Z70|1|A|A|2536
8Z70|1|A|U|2537
8Z70|1|A|U|2538
8Z70|1|A|C|2539
8Z70|1|A|A|2540
8Z70|1|A|U|2541
8Z70|1|A|U|2542
8Z70|1|A|U|2543
8Z70|1|A|U|2544

Current chains

Chain A

25S rRNA

Nearby chains

Chain J

Large ribosomal subunit protein eL8A

Chain SQ

Small ribosomal subunit protein eS1A