HL_8Z70_089
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AACAGAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Z70_089 not in the Motif Atlas
- Homologous match to HL_8C3A_057
- Geometric discrepancy: 0.2526
- The information below is about HL_8C3A_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_72777.1
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8Z70|1|A|A|2673
8Z70|1|A|A|2674
8Z70|1|A|C|2675
8Z70|1|A|A|2676
8Z70|1|A|G|2677
8Z70|1|A|A|2678
8Z70|1|A|A|2679
8Z70|1|A|A|2680
8Z70|1|A|U|2681
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain M
- Large ribosomal subunit protein uL5B
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