HL_8Z71_067
3D structure
- PDB id
- 8Z71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCUGAUUUUAUGCAGGCC
- Length
- 19 nucleotides
- Bulged bases
- 8Z71|1|A|U|1569, 8Z71|1|A|A|1571
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Z71|1|A|G|1561
8Z71|1|A|C|1562
8Z71|1|A|C|1563
8Z71|1|A|U|1564
8Z71|1|A|G|1565
8Z71|1|A|A|1566
8Z71|1|A|U|1567
8Z71|1|A|U|1568
8Z71|1|A|U|1569
8Z71|1|A|U|1570
8Z71|1|A|A|1571
8Z71|1|A|U|1572
8Z71|1|A|G|1573
8Z71|1|A|C|1574
8Z71|1|A|A|1575
8Z71|1|A|G|1576
8Z71|1|A|G|1577
8Z71|1|A|C|1578
8Z71|1|A|C|1579
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- Large ribosomal subunit protein uL2A
- Chain J
- Large ribosomal subunit protein eL8A
- Chain Z
- Large ribosomal subunit protein uL23
Coloring options: