HL_8Z71_070
3D structure
- PDB id
- 8Z71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGUUAUCUUUU
- Length
- 11 nucleotides
- Bulged bases
- 8Z71|1|A|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Z71_070 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3465
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Z71|1|A|A|1679
8Z71|1|A|G|1680
8Z71|1|A|U|1681
8Z71|1|A|U|1682
8Z71|1|A|A|1683
8Z71|1|A|U|1684
8Z71|1|A|C|1685
8Z71|1|A|U|1686
8Z71|1|A|U|1687
8Z71|1|A|U|1688
8Z71|1|A|U|1689
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain T
- Large ribosomal subunit protein eL19A
- Chain W
- Large ribosomal subunit protein eL22A
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