HL_8ZFF_024

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

8ZFF|1|A|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZFF_024 not in the Motif Atlas

Homologous match to HL_6CZR_098

Geometric discrepancy: 0.3708

The information below is about HL_6CZR_098

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8ZFF|1|A|U|1165
8ZFF|1|A|G|1166
8ZFF|1|A|A|1167
8ZFF|1|A|U|1168
8ZFF|1|A|A|1169
8ZFF|1|A|A|1170
8ZFF|1|A|A|1171

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain U

Small ribosomal subunit protein bS21