HL_8ZFF_066

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

8ZFF|1|a|C|1493, 8ZFF|1|a|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZFF_066 not in the Motif Atlas

Homologous match to HL_7A0S_037

Geometric discrepancy: 0.4607

The information below is about HL_7A0S_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39243.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8ZFF|1|a|G|1492
8ZFF|1|a|C|1493
8ZFF|1|a|A|1494
8ZFF|1|a|A|1495
8ZFF|1|a|A|1496
8ZFF|1|a|U|1497
8ZFF|1|a|C|1498

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2