HL_8ZFF_080

3D structure

PDB id

8ZFF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome without hypoxia-induced rRNA modifications

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

8ZFF|1|a|A|2211, 8ZFF|1|a|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZFF_080 not in the Motif Atlas

Geometric match to HL_8B0X_079

Geometric discrepancy: 0.0992

The information below is about HL_8B0X_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42293.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

8ZFF|1|a|G|2209
8ZFF|1|a|U|2210
8ZFF|1|a|A|2211
8ZFF|1|a|A|2212
8ZFF|1|a|U|2213
8ZFF|1|a|C|2214
8ZFF|1|a|C|2215

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2