HL_8ZFI_065
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 8ZFI|1|b|U|747, 8ZFI|1|b|A|751, 8ZFI|1|b|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZFI_065 not in the Motif Atlas
- Geometric match to HL_4WF9_023
- Geometric discrepancy: 0.1202
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8ZFI|1|b|U|744
8ZFI|1|b|G|745
8ZFI|1|b|U|746
8ZFI|1|b|U|747
8ZFI|1|b|G|748
8ZFI|1|b|A|749
8ZFI|1|b|A|750
8ZFI|1|b|A|751
8ZFI|1|b|A|752
8ZFI|1|b|A|753
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain 6
- 50S ribosomal protein L34
- Chain d
- 50S ribosomal protein L3
- Chain t
- 50S ribosomal protein L22
- Chain z
- eRAP-NC
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