HL_8ZFI_086

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

8ZFI|1|b|U|1729

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZFI_086 not in the Motif Atlas

Geometric match to HL_7QQP_002

Geometric discrepancy: 0.1009

The information below is about HL_7QQP_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

8ZFI|1|b|C|1728
8ZFI|1|b|U|1729
8ZFI|1|b|C|1730
8ZFI|1|b|G|1731

Current chains

Chain b

RNA (2903-MER)

Nearby chains