HL_8ZFI_098

3D structure

PDB id

8ZFI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZFI|1|b|G|2303
8ZFI|1|b|G|2304
8ZFI|1|b|U|2305
8ZFI|1|b|C|2306
8ZFI|1|b|G|2307
8ZFI|1|b|G|2308
8ZFI|1|b|A|2309
8ZFI|1|b|C|2310
8ZFI|1|b|A|2311
8ZFI|1|b|U|2312
8ZFI|1|b|C|2313

Current chains

Chain b

RNA (2903-MER)

Nearby chains

Chain f

50S ribosomal protein L5