HL_8ZHB_026
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZHB_026 not in the Motif Atlas
- Homologous match to HL_8CRE_025
- Geometric discrepancy: 0.072
- The information below is about HL_8CRE_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8ZHB|1|LA|G|1147
8ZHB|1|LA|G|1148
8ZHB|1|LA|A|1149
8ZHB|1|LA|U|1150
8ZHB|1|LA|G|1151
8ZHB|1|LA|A|1152
8ZHB|1|LA|A|1153
8ZHB|1|LA|C|1154
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LB
- 5S ribosomal RNA; 5S rRNA
- Chain LI
- Large ribosomal subunit protein uL30A
- Chain Lg
- Large ribosomal subunit protein eL32
- Chain Lh
- Large ribosomal subunit protein eL33A
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