HL_8ZHB_073
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- 8ZHB|1|LC|A|54
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|LC|C|47
8ZHB|1|LC|A|48
8ZHB|1|LC|G|49
8ZHB|1|LC|C|50
8ZHB|1|LC|G|51
8ZHB|1|LC|A|52
8ZHB|1|LC|A|53
8ZHB|1|LC|A|54
8ZHB|1|LC|U|55
8ZHB|1|LC|G|56
Current chains
- Chain LC
- 5.8S rRNA (158-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LZ
- Large ribosomal subunit protein uL23
- Chain Lj
- Large ribosomal subunit protein uL29A
- Chain Ll
- Large ribosomal subunit protein eL37A
- Chain Ln
- Large ribosomal subunit protein eL39
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