HL_8ZHB_113
3D structure
- PDB id
- 8ZHB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGCUAGGAAC
- Length
- 10 nucleotides
- Bulged bases
- 8ZHB|1|Ta|U|34, 8ZHB|1|Ta|A|35, 8ZHB|1|Ta|A|38, 8ZHB|1|Ta|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHB|1|Ta|G|31
8ZHB|1|Ta|G|32
8ZHB|1|Ta|C|33
8ZHB|1|Ta|U|34
8ZHB|1|Ta|A|35
8ZHB|1|Ta|G|36
8ZHB|1|Ta|G|37
8ZHB|1|Ta|A|38
8ZHB|1|Ta|A|39
8ZHB|1|Ta|C|40
Current chains
- Chain Ta
- tRNA (77-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Sc
- Small ribosomal subunit protein uS12A
- Chain Sg
- Small ribosomal subunit protein eS30A
- Chain mR
- RNA (5'-R(P*GP*AP*UP*UP*GP*AP*CP*CP*CP*UP*U)-3')
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