HL_8ZTU_010

3D structure

PDB id

8ZTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8ZTU|1|A|U|464, 8ZTU|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTU_010 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.316

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8ZTU|1|A|G|462
8ZTU|1|A|U|463
8ZTU|1|A|U|464
8ZTU|1|A|A|465
8ZTU|1|A|A|466
8ZTU|1|A|U|467
8ZTU|1|A|A|468
8ZTU|1|A|C|469
8ZTU|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains