3D structure

PDB id
8ZTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome arrested by PepNL
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8ZTU_091 not in the Motif Atlas
Homologous match to HL_7A0S_063
Geometric discrepancy: 0.0826
The information below is about HL_7A0S_063
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_34789.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
335

Unit IDs

8ZTU|1|a|C|2658
8ZTU|1|a|G|2659
8ZTU|1|a|A|2660
8ZTU|1|a|G|2661
8ZTU|1|a|A|2662
8ZTU|1|a|G|2663

Current chains

Chain a
23S rRNA

Nearby chains

Chain g
50S ribosomal protein L6

Coloring options:


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