HL_8ZTV_010

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8ZTV|1|A|U|464, 8ZTV|1|A|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_010 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.337

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8ZTV|1|A|G|462
8ZTV|1|A|U|463
8ZTV|1|A|U|464
8ZTV|1|A|A|465
8ZTV|1|A|A|466
8ZTV|1|A|U|467
8ZTV|1|A|A|468
8ZTV|1|A|C|469
8ZTV|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains