HL_8ZTV_016

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_016 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0794

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8ZTV|1|A|C|862
8ZTV|1|A|U|863
8ZTV|1|A|A|864
8ZTV|1|A|A|865
8ZTV|1|A|C|866
8ZTV|1|A|G|867

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S5