HL_8ZTV_045

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_045 not in the Motif Atlas

Homologous match to HL_4WF9_015

Geometric discrepancy: 0.0796

The information below is about HL_4WF9_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8ZTV|1|a|C|462
8ZTV|1|a|G|463
8ZTV|1|a|U|464
8ZTV|1|a|G|465
8ZTV|1|a|A|466
8ZTV|1|a|G|467

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain e

50S ribosomal protein L4