HL_8ZTV_047

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8ZTV|1|a|U|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_047 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.231

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8ZTV|1|a|C|544
8ZTV|1|a|U|545
8ZTV|1|a|U|546
8ZTV|1|a|A|547
8ZTV|1|a|G|548
8ZTV|1|a|G|549

Current chains

Chain a

23S rRNA

Nearby chains

Chain q

50S ribosomal protein L21