HL_8ZTV_049

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

8ZTV|1|a|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_049 not in the Motif Atlas

Geometric match to HL_7KKV_003

Geometric discrepancy: 0.2955

The information below is about HL_7KKV_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8ZTV|1|a|C|611
8ZTV|1|a|G|612
8ZTV|1|a|A|613
8ZTV|1|a|A|614
8ZTV|1|a|U|615
8ZTV|1|a|A|616
8ZTV|1|a|G|617

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L4