HL_9AX7_024

3D structure

PDB id

9AX7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex (tRNA-fMet M1 + CUG start codon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

9AX7|1|A|C|1136, 9AX7|1|A|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9AX7_024 not in the Motif Atlas

Homologous match to HL_4LFB_026

Geometric discrepancy: 0.2786

The information below is about HL_4LFB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

9AX7|1|A|G|1134
9AX7|1|A|U|1135
9AX7|1|A|C|1136
9AX7|1|A|C|1137
9AX7|1|A|G|1138
9AX7|1|A|G|1139
9AX7|1|A|C|1140

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S9