HL_9AX8_042
3D structure
- PDB id
- 9AX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCUCGCG
- Length
- 7 nucleotides
- Bulged bases
- 9AX8|1|A|C|1728, 9AX8|1|A|U|1729, 9AX8|1|A|C|1730, 9AX8|1|A|G|1731, 9AX8|1|A|C|1732
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AX8_042 not in the Motif Atlas
- Homologous match to HL_7A0S_043
- Geometric discrepancy: 0.5487
- The information below is about HL_7A0S_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9AX8|1|A|C|1727
9AX8|1|A|C|1728
9AX8|1|A|U|1729
9AX8|1|A|C|1730
9AX8|1|A|G|1731
9AX8|1|A|C|1732
9AX8|1|A|G|1733
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: