HL_9AX8_075

3D structure

PDB id

9AX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9AX8|1|a|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9AX8_075 not in the Motif Atlas

Homologous match to HL_5J7L_005

Geometric discrepancy: 0.4004

The information below is about HL_5J7L_005

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

9AX8|1|a|C|207
9AX8|1|a|U|208
9AX8|1|a|U|209
9AX8|1|a|C|210
9AX8|1|a|G|211
9AX8|1|a|G|212

Current chains

Chain a

16S ribosomal RNA

Nearby chains