HL_9B0G_115

3D structure

PDB id

9B0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class4 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

AGGUGAACCU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0G|1|S2|A|1845
9B0G|1|S2|G|1846
9B0G|1|S2|G|1847
9B0G|1|S2|U|1848
9B0G|1|S2|G|1849
9B0G|1|S2|A|1850
9B0G|1|S2|A|1851
9B0G|1|S2|C|1852
9B0G|1|S2|C|1853
9B0G|1|S2|U|1854

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

60S ribosomal protein L41

Chain SO

Small ribosomal subunit protein uS11