HL_9B0P_056

3D structure

PDB id

9B0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class1 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AGCCCCGAGGGGCU

Length

14 nucleotides

Bulged bases

9B0P|1|L5|G|4104

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B0P|1|L5|A|4098
9B0P|1|L5|G|4099
9B0P|1|L5|C|4100
9B0P|1|L5|C|4101
9B0P|1|L5|C|4102
9B0P|1|L5|C|4103
9B0P|1|L5|G|4104
9B0P|1|L5|A|4105
9B0P|1|L5|G|4106
9B0P|1|L5|G|4107
9B0P|1|L5|G|4108
9B0P|1|L5|G|4109
9B0P|1|L5|C|4110
9B0P|1|L5|U|4111

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LG

60S ribosomal protein L7a

Chain Lg

60S ribosomal protein L34

Chain SB

40S ribosomal protein S3a