3D structure

PDB id
9B0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human Hibernating class1 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
UAUUUUGUUGGUUUUCG
Length
17 nucleotides
Bulged bases
9B0P|1|S2|G|891, 9B0P|1|S2|U|899
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B0P|1|S2|U|885
9B0P|1|S2|A|886
9B0P|1|S2|U|887
9B0P|1|S2|U|888
9B0P|1|S2|U|889
9B0P|1|S2|U|890
9B0P|1|S2|G|891
9B0P|1|S2|U|892
9B0P|1|S2|U|893
9B0P|1|S2|G|894
9B0P|1|S2|G|895
9B0P|1|S2|U|896
9B0P|1|S2|U|897
9B0P|1|S2|U|898
9B0P|1|S2|U|899
9B0P|1|S2|C|900
9B0P|1|S2|G|901

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SG
40S ribosomal protein S6

Coloring options:

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